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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015909762.1_cds_XP_016459883.1_53363
CDS Infomation

[gene=LOC107783429] [db_xref=GeneID:107783429] [protein=glycerophosphodiester phosphodiesterase GDPD1, chloroplastic-like] [protein_id=XP_016459883.1] [location=join(10864..10960,11054..11235,11999..12058,12154..12531,12818..13014,13296..13521)] [gbkey=CDS]
Sequence

ATGGCTCTTAAAGCCGTTCATGTTTCTGATGTTCCCAATCTAGATCAAGTCCCTGAGAAA
CCATCTTTAGCTATATATTCCACCCGCTTCTCTCAAGGGGTTGAAATTGGAAGAACATCG
TTTAAGCCGTCGAAATTTTTAGTCGTTGGCCATAGAGGGAACGGGATGAATTTTTTGCAG
TCTTCTGACCGGAGAATGAAGGCTGTTAAGGAAAATTCTATTATTTCATTCAATTCAGCT
GCTAATTACCCCATCGATTTTATCGAGTTTGACGTTCAGGTGACAAAGGATGATTGCCCG
ATCATTTTTCACGACAACTTCATCCTCACTCAAGAAAATGGTACAATCTATGAAAGAAGA
GTAACCGAATTAACGCTTGCTGAATTTCTTAGCTATGGACCTCAAAGAGAAGAGAGTGTC
ACTGGAAAACCTTTACTGAGGAAAACAAAAGATGGAAAGATTGTTAGCTGGACAGTTGAA
ACCGATGATTCAGCGTGTACCTTAAAAGAAGCTTTCGAGAAAGTGAACGCTTCTGTAGGC
TTCAACATTGAACTCAAATTTGATGACCACATTGTTTATGAGCAAGACTACCTCGTCCGC
GTTCTTCAAGCCATTTTACATGTTATCTCAGAGCATGCTAAAGGCAGACCAATTATCTTC
TCAAGTTTCCAGCCTGATGCTGCTCTGCTTGTCAAGAAACTCCAGACTACTTACCCTGTA
TTTTTCCTCACAAATGGAGGAACAGAAATTTACTATGATGTTAGAAGGAACTCATTGGAG
GAGGCCATTGAGTTGTGTTTAGAGGGTGGTCTTGAAGGGATTGTTTCAGAAGTGAAAGGT
ATATTTAGGAATTCAGGAGCAGTTAACAAGATCAAAGAGTCTAAACTCTCTCTTATGACA
TATGGCAAACTGAATAACGTGCCTGAAGCTGTATATATGCAACATCTAATGGGAATAGAT
GGGGTGATAGTGGATTTGGTTCAAGAAATAACAGAGGCTGTGAGCAACCTAGTGAAGAAA
CCAGAGGAGGTTGAAGATGAGATTTTGCTGGAAGGGGAGGAAAAAGTTCAAAATAGACCT
CAATTCTCACAAAGGGAATTGTCTTTTCTTCTCAAGCTTATCCCTGAATTGATACAATAA

Peptide Sequence

PEP ID

XP_016459883.1
PEP Infomation

PREDICTED: glycerophosphodiester phosphodiesterase GDPD1, chloroplastic-like [Nicotiana tabacum]
Sequence

MALKAVHVSDVPNLDQVPEKPSLAIYSTRFSQGVEIGRTSFKPSKFLVVGHRGNGMNFLQ
SSDRRMKAVKENSIISFNSAANYPIDFIEFDVQVTKDDCPIIFHDNFILTQENGTIYERR
VTELTLAEFLSYGPQREESVTGKPLLRKTKDGKIVSWTVETDDSACTLKEAFEKVNASVG
FNIELKFDDHIVYEQDYLVRVLQAILHVISEHAKGRPIIFSSFQPDAALLVKKLQTTYPV
FFLTNGGTEIYYDVRRNSLEEAIELCLEGGLEGIVSEVKGIFRNSGAVNKIKESKLSLMT
YGKLNNVPEAVYMQHLMGIDGVIVDLVQEITEAVSNLVKKPEEVEDEILLEGEEKVQNRP
QFSQRELSFLLKLIPELIQ

Transcript Sequence

Gene sequence data has not been registered.